Okay I will scrap that fucked up fix. I got a new fix. I found out I can check if my Crafting Recipe is used inside the Arcane Table and just make it not return a result when that is the case. I will only do that for the Shapeless Nugget/Chunk/Billet/Ingot/Block etc Recipes, so please report future Recipe Conflicts too. 
I will check out https://www.curseforge.com/minecraft/mc-mods/tc4tweaks and see if it is recommendable. ^^